PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS62318.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 149aa    MW: 17108.4 Da    PI: 10.0368
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS62318.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.72.4e-1493135855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er+RR++iN++f  L +l+P++     +K++K++iL +++eY+++L+
  EPS62318.1  93 SERKRREKINERFLILGSLVPSD-----GKVDKVSILDHTIEYLRELE 135
                 7*********************9.....9****************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.97485134IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.10E-1288139No hitNo description
SuperFamilySSF474592.22E-1788146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-1689148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-1691140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.9E-1292135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
ETHYRSLLSN LLKGSHQLIL GPYSRNGNGE SSFKCWVSDG TSPRSITPPQ SLLKKVLLEV  60
PRLLQTRTSG VSEQRRNNLK PESDENDRNR VLSERKRREK INERFLILGS LVPSDGKVDK  120
VSILDHTIEY LRELESKVEE LRSRKEAVE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19398ERKRRE
29499RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072763.18e-47PREDICTED: transcription factor EGL1-like isoform X1
RefseqXP_011072770.17e-47PREDICTED: transcription factor EGL1-like isoform X2
TrEMBLS8DHK31e-102S8DHK3_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc08g081140.2.15e-39(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45762435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41315.14e-34bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]